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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902161.1_cds_XP_016452180.1_46447
CDS Infomation

[gene=LOC107776772] [db_xref=GeneID:107776772] [protein=probable aminotransferase TAT2] [protein_id=XP_016452180.1] [location=join(59701..60029,61358..61697,62068..62286,62378..62437,62689..62844,62928..63021,63533..63663)] [gbkey=CDS]
Sequence

ATGGAGACCAATGGAGTGAAAGTGAAAGCAAATTTGAGTGACGGAGTTAACAACCAAGAA
ATTGAAACCCCAAATAATATTACAATCAAAGGCATTCTTGGATTATTAATGGCTAATGTA
GAAACAGCTGAAGATGAAGATGAAGAAAATGGTGGAAAATTCAAGAAGAATATGAGGAGG
AAGAAGGTTATATCATTGGGAATGGGTGATCCTACAGCTTATTCTTGTTTCCATTCTCCT
GATGTTGCACAAAATGCTGTTCTTGAAACTCTTGCTTCTCACAAATTCAATGGTTATTCT
CCTACTGTTGGCCTTCCTCAAACCAGACGGGCAATTGCAGATTATTTGTCGAGTGACCTT
ACAGAAAAATTATGTGCAGATGATGTTTATGTCACAGCTGGTTGCACTCAAGCCATTGAA
ATAGCCTTGTCAATTCTGGCTCGCCCCGGTGCTAACATATTACTACCAAGGCCTGGTTTC
CCAATTTATGCACTTTGTGCTGCCTTTAGGCACATCGAAGTTAGATACTTTGATCTTGTT
CCGGACAAGGGCTGGGAGGTTGATCTCAAAGCTGTTGAAGCTCTTGCAGATCGTAACACA
ATTGGCATAGTTGTTATAAATCCTGGGAACCCTTGTGGAAATGTTTATAGTTATCAGCAT
CTTCAAGAGATTGCAGAAACTGCTAAGAAGCTTAGGACCATAGTGATTGCGGATGAAGTA
TACGGGCACCTTGCTTTTGGAGCTAAACCATTTGTGTCGATGGGAGTTTTTGGCGCCATT
GCTCCCGTGCTTACTCTTGGTTCTTTATCTAAGCGATGGTTAGTTCCTGGATGGCGGCTC
GGTTGGCTTGTCACAAATGATCCCAATGGCACCTTCAAAAATCCAAAGTTTGTTGAGCGC
ATTAAGAAGTATTGTGACATTTGCGGAGGTCCAGCTACCTTTATACAGGCGGCGGTCCCT
CGCATTATTCAGCAAACCGAAGAAGTTTTCTTCAGGAAGACTATTAACTTGTTGAAGTGG
ACAGCTGACATTTGTTGCGAAAAGATAAAGGAGATTCCTTGTATTAGCTGTCCACATAAA
CCAGAAGGCTCAATGGCCGTAATGGTGAAGCTGAATCTATCGCTTTTAACAGACATTAGC
GATGATATTGACTTCTGTTTCAAACTGGCGAAAGAAGAATCTGTTATACTCCTTCCAGGA
CTCGCTGTGGGTCTCAAAAACTGGATTAGAATAACCTTTGCAGCGGATCCGTCTTCTCTT
GAGGAAGCACTAGGACGGCTCAAATCGTTCTGTCAAAGGCATTCATATCAAGAAAATGGT
CATTGTTGA

Peptide Sequence

PEP ID

XP_016452180.1
PEP Infomation

PREDICTED: probable aminotransferase TAT2 [Nicotiana tabacum]
Sequence

METNGVKVKANLSDGVNNQEIETPNNITIKGILGLLMANVETAEDEDEENGGKFKKNMRR
KKVISLGMGDPTAYSCFHSPDVAQNAVLETLASHKFNGYSPTVGLPQTRRAIADYLSSDL
TEKLCADDVYVTAGCTQAIEIALSILARPGANILLPRPGFPIYALCAAFRHIEVRYFDLV
PDKGWEVDLKAVEALADRNTIGIVVINPGNPCGNVYSYQHLQEIAETAKKLRTIVIADEV
YGHLAFGAKPFVSMGVFGAIAPVLTLGSLSKRWLVPGWRLGWLVTNDPNGTFKNPKFVER
IKKYCDICGGPATFIQAAVPRIIQQTEEVFFRKTINLLKWTADICCEKIKEIPCISCPHK
PEGSMAVMVKLNLSLLTDISDDIDFCFKLAKEESVILLPGLAVGLKNWIRITFAADPSSL
EEALGRLKSFCQRHSYQENGHC

Transcript Sequence

Gene sequence data has not been registered.